| Similarity | Rank | |
|---|---|---|
| ad13 | 0.948 | 72212 |
| ad15 | 0.947 | 82097 |
| cflo | 0.913 | 96109 |
| 2kb | 0.907 | 92152 |
| 6kb | 0.905 | 69314 |
| cfup | 0.903 | 80370 |
| cclo | 0.900 | 76487 |
| r30 | 0.900 | 49653 |
| 5kb | 0.898 | 67734 |
| taa | 0.897 | 86075 |
| kox21 | 0.896 | 78220 |
| p-labeled | 0.896 | 91070 |
| 3kb | 0.894 | 65197 |
| ml1 | 0.894 | 84066 |
| phivcg9 | 0.894 | 69853 |
| ccup | 0.891 | 96053 |
| i-a | 0.889 | 63655 |
| iie | 0.888 | 95961 |
| 5x10 | 0.888 | 87842 |
| 6-kb | 0.888 | 85032 |
| supercoiled | 0.888 | 55184 |
| datp | 0.887 | 80491 |
| ml2 | 0.886 | 99281 |
| ptencl | 0.886 | 97916 |
| pbruc1 | 0.886 | 89329 |