| Similarity | Rank | |
|---|---|---|
| a-d | 0.919 | 52461 |
| 3x10 | 0.917 | 77702 |
| 9b | 0.911 | 80079 |
| 3h | 0.908 | 64475 |
| t6 | 0.907 | 53258 |
| nd4 | 0.906 | 81357 |
| 5kb | 0.905 | 67734 |
| bistability | 0.905 | 77049 |
| 3-fold | 0.904 | 95127 |
| max85 | 0.902 | 88665 |
| circularly | 0.902 | 75053 |
| phivcg9 | 0.902 | 69853 |
| linearised | 0.902 | 98998 |
| d-f | 0.901 | 92548 |
| c-g | 0.900 | 99483 |
| 2v | 0.899 | 73151 |
| nd5 | 0.899 | 75276 |
| 8å | 0.898 | 59045 |
| is902-pcr | 0.897 | 67117 |
| nd1 | 0.897 | 69650 |
| 4å | 0.897 | 78421 |
| n25 | 0.897 | 54520 |
| distamycin | 0.896 | 63705 |
| d.p.c. | 0.895 | 50918 |
| non-bonding | 0.895 | 91183 |