| Similarity | Rank | |
|---|---|---|
| ch2 | 0.853 | 83892 |
| gfcc | 0.845 | 63769 |
| pou-specific | 0.826 | 98224 |
| nf1 | 0.823 | 74179 |
| d1d2 | 0.814 | 81624 |
| ml2 | 0.814 | 99281 |
| 2kb | 0.812 | 92152 |
| antiparallel | 0.812 | 48488 |
| carboxy | 0.810 | 62217 |
| 6kb | 0.807 | 69314 |
| n25 | 0.806 | 54520 |
| noti | 0.806 | 99590 |
| 2300bp | 0.802 | 92197 |
| carboxy-terminal | 0.802 | 81663 |
| avaii | 0.800 | 97944 |
| decamer | 0.799 | 78194 |
| located | 0.798 | 64614 |
| nucleosomal | 0.797 | 79964 |
| homeo | 0.797 | 98012 |
| superdiagonal | 0.797 | 56269 |
| ncp7c | 0.794 | 89689 |
| p-labeled | 0.793 | 91070 |
| threonine | 0.792 | 81799 |
| ncp7d | 0.792 | 84295 |
| e2f-1 | 0.792 | 64450 |