| Similarity | Rank | |
|---|---|---|
| pentamer | 0.908 | 82676 |
| antiparallel | 0.901 | 48488 |
| gcn4 | 0.899 | 90045 |
| pou-specific | 0.897 | 98224 |
| apor2 | 0.895 | 55803 |
| arg17 | 0.894 | 76630 |
| scd2 | 0.891 | 42730 |
| nd4 | 0.891 | 81357 |
| decamer | 0.890 | 78194 |
| e2f-1 | 0.889 | 64450 |
| supercoiled | 0.889 | 55184 |
| avaii | 0.887 | 97944 |
| d1d2 | 0.886 | 81624 |
| lys23 | 0.886 | 88341 |
| nf1 | 0.885 | 74179 |
| dimeric | 0.885 | 72933 |
| hlh | 0.884 | 65817 |
| cys | 0.884 | 76282 |
| hindiii | 0.883 | 92999 |
| iron-bleomycin | 0.883 | 91066 |
| nd5 | 0.882 | 75276 |
| bgli-naei | 0.882 | 98078 |
| tetrad | 0.882 | 71409 |
| bglii | 0.882 | 93143 |
| phe | 0.880 | 88147 |